Chemistry 125 Lecture 44 January 26 2011 Nucleophilic

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Chemistry 125: Lecture 44 January 26, 2011 Nucleophilic Substitution and Mechanistic Tools: Stereochemistry, Rate

Chemistry 125: Lecture 44 January 26, 2011 Nucleophilic Substitution and Mechanistic Tools: Stereochemistry, Rate Law, Substrate, Nucleophile This For copyright notice see final page of this file

SN 2 Nucleophilic Substitution Generality of Nucleophilic Substitution Solvent Nu: R-L Nucleophile Substrate (+)

SN 2 Nucleophilic Substitution Generality of Nucleophilic Substitution Solvent Nu: R-L Nucleophile Substrate (+) (-) Nu-R L Product Leaving Group But there are different mechanisms! the Pragmatic Logic of Proving a Mechanism with Experiment & Theory (mostly by disproving all alternative mechanisms)

"It is an old maxim of mine that when you have excluded the impossible,

"It is an old maxim of mine that when you have excluded the impossible, whatever remains, however improbable, must be the truth. " The Adventure of the Beryl Coronet

SN 2 Nucleophilic Substitution Nu: R-L (+) Nu-R (-) L Break bond Make bond

SN 2 Nucleophilic Substitution Nu: R-L (+) Nu-R (-) L Break bond Make bond the Pragmatic Logic (Dissociation) (Association) Simultaneous of Proving a Mechanism D then A A then D “Concerted” with Experiment &(make-as-you-break) Theory (mostly by disproving all alternative mechanisms)

Concerted Nu C L Transition State A/D Nu C L Pentavalent Intermediate D/A C

Concerted Nu C L Transition State A/D Nu C L Pentavalent Intermediate D/A C Trivalent Intermediate

Concerted a Nu A/D b C a L c Transition State Nu enantiomers a

Concerted a Nu A/D b C a L c Transition State Nu enantiomers a b b C D/A L c Pentavalent Intermediate Nu C Nu c Trivalent Intermediate chiralfor chiral achiral Unlikely Which is it very exothermic normally? process. Stereochemical Implications! ( (Hammond implausibility)

Tools for Testing (i. e. Excluding) Mechanisms: Stereochemistry (J&F sec 7. 4 b) Rate

Tools for Testing (i. e. Excluding) Mechanisms: Stereochemistry (J&F sec 7. 4 b) Rate Law (J&F sec 7. 4 a) Rate Constant (J&F sec 7. 4 cdefg) Structure X-Ray and Quantum Mechanics

Nucleophilic Substitution Walden N Inversion + RL (1898) - “the most L +astounding RN

Nucleophilic Substitution Walden N Inversion + RL (1898) - “the most L +astounding RN discovery in stereochemistry since the groundbreaking work of van’t Hoff. ” E. Fischer Displacement Replacement

STEREOCHEMISTRY Kenyon and Phillips (1923) nucleophilic substitution at S O H Ph. CH 2

STEREOCHEMISTRY Kenyon and Phillips (1923) nucleophilic substitution at S O H Ph. CH 2 CH +33° CH 3 (A/D, A favored by vacant d orbital of S) Ph. CH CH CH 3 -OH CH 3 O SO 2 Ph. CH 2 CH +31° Why not. Backside avoid H Attack in CH 3 nucleophilic acetate steps by substitution nucleophilic O substitution at C=O using OH? Because at saturated O C CH 3 (A/D, A favored by. C. *) C it attacks H (the only step involving chiral C) Same as O O O starting O C CH 3 material? O H O C CH 3 HO OH Ph. CH 2 CH CH 3 Inversion! -7° -32° (R) (S) Proves nothing Cl SO 2 CH 3

Concerted Nu C L Pentavalent Transition State A/D Nu C L Pentavalent Intermediate D/A

Concerted Nu C L Pentavalent Transition State A/D Nu C L Pentavalent Intermediate D/A C Trivalent Intermediate Trivalent intermediate could be attacked from either face racemization, not inversion.

Tools for Testing (i. e. Excluding) Mechanisms: Stereochemistry Rate Law Rate Constant Structure X-Ray

Tools for Testing (i. e. Excluding) Mechanisms: Stereochemistry Rate Law Rate Constant Structure X-Ray and Quantum Mechanics

Na. OEt + Et. Br Et. OEt + Na. Br Second Order (SN 2)

Na. OEt + Et. Br Et. OEt + Na. Br Second Order (SN 2) rate d[Et. O-] = k 2 [Et. O-] [Et. Br] dt 0 [Na. OEt] ( fixed [Et. Br] )

Concerted A/D D/A Nu enters Nu C L Pentavalent Transition State Nu C Nu

Concerted A/D D/A Nu enters Nu C L Pentavalent Transition State Nu C Nu enters L Pentavalent Intermediate C Trivalent Intermediate Initial rate-limiting dissociation in D/A would give a rate independent of [Nu], not SN 2. Not D/A

Na. OEt + Et. Br Analogy Et. O- + Et. Br H+ Et. OH

Na. OEt + Et. Br Analogy Et. O- + Et. Br H+ Et. OH Et. OEt ++ Et. O: + Et. Br H+ Et. OH Et. OEt H H H Et. OEt + Na. Br p. Ka 15. 7 -1. 7 1017. 4 at equilibrium Ratio should be much less drastic at early SN 2 transition state. Second Order (SN 2) rate d[Et. O-] = k 2 [Et. O-] [Et. Br] dt + k 1 [Et. Br] [Et. OH] [Et. Br] ~ const Pseudo First Order First(D/A? ) Order k 2 = 20, 000 k 0 [Na. OEt] Is it reasonable to be so different?

Tools for Testing (i. e. Excluding) Mechanisms: Stereochemistry Rate Law Rate Constant Structure X-Ray

Tools for Testing (i. e. Excluding) Mechanisms: Stereochemistry Rate Law Rate Constant Structure X-Ray and Quantum Mechanics

Rate Constant Dependance on Nu: R-L Nucleophile Substrate 23 x Leaving Group R krel

Rate Constant Dependance on Nu: R-L Nucleophile Substrate 23 x Leaving Group R krel CH 3 145 CH 3 CH 2 [1] CH 3 CH 2 0. 82 1. 2 x (CH 3)2 CHCH 2 3000 x Solvent Nu-R L Product RBr + Iacetone / 25°C C-L antibonding node 128 x ~same H 0. 036 >15 x 0. 000012 LUMO 145 x 0. 0078 (CH 3)3 C ~ 0. 0005 ? (CH 3)3 CCH 2 (-) (+) Surface Potential +26 to -25 kcal/mole Something else happens e. g. J&F Table 7. 1 p. 275

Methyl Ethyl iso-Propyl Steric Hindrance Total Density (vd. W) -Methylation t-Butyl

Methyl Ethyl iso-Propyl Steric Hindrance Total Density (vd. W) -Methylation t-Butyl

Methyl Ethyl iso-Propyl LUMO at 0. 06 LUMO at 0. 04 Total Density (vd.

Methyl Ethyl iso-Propyl LUMO at 0. 06 LUMO at 0. 04 Total Density (vd. W) -Methylation t-Butyl

Methyl Ethyl iso-Propyl Surface Potential +26 to -25 kcal/mole -Methylation t-Butyl

Methyl Ethyl iso-Propyl Surface Potential +26 to -25 kcal/mole -Methylation t-Butyl

Ethyl [1] n-Propyl 0. 82 iso-Butyl 0. 036 -Methylation Neopentyl 0. 000012 No way

Ethyl [1] n-Propyl 0. 82 iso-Butyl 0. 036 -Methylation Neopentyl 0. 000012 No way to avoid the third -CH 3

Nu C L C Transition State Backside Attack Planar Trivalent Intermediate Might it be

Nu C L C Transition State Backside Attack Planar Trivalent Intermediate Might it be possible to have frontside attack? or formation of a non-planar cation? (remember planar BH 3) C Nu L Transition State Frontside Attack C+ Nonplanar Trivalent Intermediate

“In 1939 Bartlett and Knox published Molecule specifically the account of their work on

“In 1939 Bartlett and Knox published Molecule specifically the account of their work on the bridgedesigned and prepared head chloride, apocamphyl chloride. I to test these believed then, and I believe now, that this mechanistic questions was a fantastically influential paper. For thirty years afterwards, no one really accepted any mechanism unless it had been tested out on a bridgehead case. Indeed, the Bartlett-Knox paper shaped the interests and viewpoint of many chemists about the kind of physical organic they wanted to do. ” John D. Roberts Caltech 1975 Bartlett and Knox * (J. Am. Chem. Soc. - 1939)

“bridgehead” chloride Cl boat c-hexane with a bridge bicyclo[2. 2. 1]heptane Flattening would generate

“bridgehead” chloride Cl boat c-hexane with a bridge bicyclo[2. 2. 1]heptane Flattening would generate highly strained angles (estimated >23 kcal/mole). Cation would not be planar. Backside of *C-Cl is inaccessible, and inversion would be impossible. Attack would have to be frontside. Bartlett and Knox * (J. Am. Chem. Soc. - 1939)

“C=C bonds cannot originate from such a bridgehead. ” (Bredt’s Rule) Although there are

“C=C bonds cannot originate from such a bridgehead. ” (Bredt’s Rule) Although there are -H atoms, they are not in the anti position necessary to allow CH - *C-X overlap during elimination of H-X to form C=C. Horrid Overlap! gauche H H H Would competition from loss of HCl make it impossible to measure the expected really slow rate of substitution? NO Bartlett and Knox * (J. Am. Chem. Soc. - 1939)

C Nu >>106 slower than typical backside attack L C+ >109 slower than from

C Nu >>106 slower than typical backside attack L C+ >109 slower than from Et(CH 3)2 C-Cl 60°cooler and without Ag+ pull on Cl instead of pushing at C R-Cl: + Ag+ R+ + Ag. Cl ( ) Bartlett and Knox * (J. Am. Chem. Soc. - 1939)

Cycloalkyl Halides (e. g. J&F Table 7. 2) krelative ~109° 60° [1] <0. 0001

Cycloalkyl Halides (e. g. J&F Table 7. 2) krelative ~109° 60° [1] <0. 0001 strain in starting material ? ? ? 90° 109° Br 120° C C C H sp 2 I increased strain in transition state 0. 008 1. 6 0. 01 OK bent

Rate Constant Dependance on Nu: Nucleophile Nu Solvent R-L (+) Nu-R Leaving Substrate Group

Rate Constant Dependance on Nu: Nucleophile Nu Solvent R-L (+) Nu-R Leaving Substrate Group krel (-) L Product p. Ka (Nu. H+) H 2 O [1] -1. 7 F- 80 3. 2 Cl- 1, 000 -8 Br- 10, 000 -9 HO- 16, 000 15. 7 I- 80, 000 -10 HS- 126, 000 7 For first-row elements nucleophilicity (attack C-L ) parallels basicity (attack H+). Both require high HOMO. But as atoms get bigger, they get better at attacking C-L (compared to attacking H+) e. g. J&F Sec. 7. 4 d, Table 7. 3

Rate Constant Dependance on Nucleophile Nu R-L Leaving Substrate Group krel p. Ka [1]

Rate Constant Dependance on Nucleophile Nu R-L Leaving Substrate Group krel p. Ka [1] -1. 7 F- 80 3. 2 Cl- 1, 000 -8 Br- 10, 000 -9 HO- 16, 000 15. 7 I- 80, 000 -10 HS- 126, 000 7 Nu-R L Polar solvents accelerate reactions that generate (or concentrate) charge, and vice versa. (Nu. H+) krel CH 3 I in H 2 O harder [1] to break 14 H-bonds to smaller ions 160 krel CH 3 Br in Acetone Backwards H 2 O (-) (+) 11 5 Sensible Nu: Solvent [1] e. g. J&F Sec. 7. 4 dg

End of Lecture 44 Jan. 26, 2011 Copyright © J. M. Mc. Bride 2011.

End of Lecture 44 Jan. 26, 2011 Copyright © J. M. Mc. Bride 2011. Some rights reserved. Except for cited third-party materials, and those used by visiting speakers, all content is licensed under a Creative Commons License (Attribution-Non. Commercial-Share. Alike 3. 0). Use of this content constitutes your acceptance of the noted license and the terms and conditions of use. Materials from Wikimedia Commons are denoted by the symbol . Third party materials may be subject to additional intellectual property notices, information, or restrictions. The following attribution may be used when reusing material that is not identified as third-party content: J. M. Mc. Bride, Chem 125. License: Creative Commons BY-NC-SA 3. 0