Patchy Colloids Proteins and Network Forming Liquids Analogies
- Slides: 47
Patchy Colloids, Proteins and Network Forming Liquids: Analogies and new insights from computer simulations Lyon - CECAM - June 26 -28 Francesco Sciortino Dynamics in patchy colloids and network forming liquids: gels and strong glass-forming liquids
Motivations • The fate of the liquid state…. Gels and phase separation: essential features (Sticky colloids Proteins, network-forming liquids) Models of patchy particles. Why to revisit them ? • Thermodynamic and dynamic behavior of new patchy colloids. • Clues in understanding dynamics in network forming liquids (Silica, water…. ) • Essential ingredients of “strong behavior” (A. Angell scheme) in glass-forming liquids.
Liquid-Gas Spinodal Glass line (D->0) Binary Mixture LJ particles “Equilibrium” “homogeoues” arrested states only for large packing fraction
The general (spherical) case (for hard core complemented by attraction)
Nmax=4 phase diagram - Isodiffusivity lines
The PMW model J. Kolafa and I. Nezbeda, Mol. Phys. 161 87 (1987) V(r) Hard-Sphere + 4 sites (2 H, 2 LP) Tetrahedral arrangement r u 0 (energy scale) H-LP interact via a SW Potential, of range l=0. 15 s. s (length scale) Bonding is properly defined --- Lowest energy state is well defined
The PMS Model Ford, Auerbach, Monson, J. Chem. Phys, 8415, 121 (2004) Silicon Four sites (tetrahedral) Oxygen Two sites 145. 8 o SW interaction between Si sites and O sites s. OO=1. 6 s 1/2 l=[1 -3 /2]s
Equilibrium phase diagram (PMW)
Pagan and Gunton JCP (2005)
Equilibrium Phase Diagram PSM
Critical Point of PMW GC simulation BOX SIZE=6 s TC=0. 1095 f. C=0. 153
Critical Point of PMS GC simulation BOX SIZE=9 s TC=0. 075 f. C=0. 0445 s=0. 45
Potential Energy for the PMW Optimal density !
Potential Energy -- Approaching the ground state Progressive increase in packing prevents approach to the GS
E-Egs vs. 1/T
Potential Energy along isotherms Optimal density Hints of a LL CP
S(q) in the phase-separation region
S(q) in the network region
PMS -Potential Energy
PMS E vs 1/T
PMS Structure (r-space)
Structure (q-space)
Summary of static data Phase Separation Region of phase separation Optimal Network Region Arrhenius Approach to Ground State Packing Region
Diffusion Coefficient
D along isotherms Diffusion Anomalies
Isodiffusivities …. (PMW) …. Isodiffusivities
Si dynamic in PSM
Comparing different potentials Bonded-triples angle q
How to compare these (and other) models for tetracoordinated liquids ? Focus ONLY on the # of 4 -coordinated particles (other particles are “bond-mediators”) (#) Length scale ---- nn-distance among 4 -coordinated particles (l 44) Scaled Density = # (l 44 )3/V Energy scale ---- Tc
Comparing E(n) at low T
Comparing isodiffusivity lines
Analogies with other network-forming potentials ST 2 (Poole) SPC/E Faster on compression BKS silica (Saika-Voivod) Slower on compression
Water Phase Diagram F ~ 0. 34
Comments • Directional interaction and limited valency are essential ingredients for offering a new final fate to the liquid state and in particular to arrested states at low f • The resulting low T liquid state is (along isochores) a strong liquid. Directional bonding is essential for being strong. • Gels and strong liquids are two faces of the same medal.
Graphic Summary Two glass lines ? Fragile Liquids Colloidal Glasses Strong liquids - Gels Arrest line
Coworkers: Cristiano De Michele (PMW, PMS) Simone Gabrielli (PMW) Piero Tartaglia Emanuela Zaccarelli
http: //www. socobim. de/
Gelation as a result of phase separation (interrupted by the glass transition) T T f f
Density Anomalies… (and possible 2’nd CP)
D vs (1 -pb)
D vs (1 -pb) --- (MC) D ~ f 04 ~(Stanley-Teixeira)
G. Foffi, E. Zaccarelli, S. V. Buldyrev, F. Sciortino, P. Tartaglia Aging in short range attractive colloids: A numerical study J. Chem. Phys. 120, 1824, 2004
- Example of colloids and its uses
- Colloidal state of matter
- Virginia woolf on james joyce
- Bees hive bears analogy
- Analogy between linear and rotational motion
- Animal/habitat analogy examples
- Types of colloids and examples
- Colloidal table
- Anaesthesit
- Difference between colloids and crystalloids
- Crystalloids
- Colloids and interfaces
- Tyndall effect is an optical property.
- Solutions, suspensions and colloids activity
- Molarity by dilution worksheet answers
- Colloids in blood
- Relationship analogy
- Part of a whole analogy
- Author write chef cook analogy
- Types of analogy relationships
- Similies about summer
- Zebras adaptations
- Analogies zebra stripes leopard
- Cell city drawing
- Significant figures ap chemistry
- Science fiction often uses nautical analogies
- Plant cell house analogy
- Image analogies
- Give an example of homeostasis.
- What type of analogy is author write chef cook
- Section 8-1 carbohydrates fats and proteins answer key
- Motifs and domains of proteins
- Organic compounds such as proteins and starches are too
- Lbv foods examples
- Section 8-1 carbohydrates fats and proteins answer key
- Salting in
- Definition protein
- Dna rna and proteins study guide answers
- Protein structure
- What is the connection between genes and proteins
- Integral and peripheral proteins
- Amidomalonate synthesis mechanism
- Ribosome factory part or worker
- Does exocytosis require energy
- Difference between affinity and ion exchange chromatography
- Organelle that modifies sorts and packages proteins
- Diabetes diet chart
- Analogy for microtubules