Community Validation of Influenzalike Illness as a Predictor

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Community Validation of Influenza-like Illness as a Predictor of Influenza Jonathan L. Temte, MD/Ph.

Community Validation of Influenza-like Illness as a Predictor of Influenza Jonathan L. Temte, MD/Ph. D & Alexis Eastman, MS-2 University of Wisconsin School of Medicine and Public Health Peter A. Shult, Ph. D, Carol J. Kirk & Mary Wedig Wisconsin State Laboratory of Hygiene Madison, Wisconsin

Influenza-like Illness § Definition § Fever of 100 o. F (37. 8 o. C)

Influenza-like Illness § Definition § Fever of 100 o. F (37. 8 o. C) or higher § Cough and/or Sore Throat § Not due to any other illness § Utility § Simple and elegant § Clinically relevant § Easily ascertained

ILI uses § Community surveillance of influenza § Clinical identification of influenza infection §

ILI uses § Community surveillance of influenza § Clinical identification of influenza infection § High PPV from research protocols § Adults § Children

Factors Affecting Symptoms Host Factors Age Viral Factors Viral Strain Immune Status Viral Subtype

Factors Affecting Symptoms Host Factors Age Viral Factors Viral Strain Immune Status Viral Subtype Underlying Disease

Purpose of Study § Review the contents of a large database § Surveillance data

Purpose of Study § Review the contents of a large database § Surveillance data emerging from a partnership between a public health laboratory and primary care clinicians § Symptoms and virus identification § Validate ILI for influenza infection § Community—not research—perspective

The Surveillance Database § Partnership of WSLH and UW-DFM since 1994 § Major modification

The Surveillance Database § Partnership of WSLH and UW-DFM since 1994 § Major modification of symptom check off in 1997 § Opportunistic sampling with “fee-exempt” virus culture § physicians obtain specimens, record demographic and symptom data, sample is transported to WSLH by courier. § Standard culture methods with isolation rate = 45% § Limited, de-identified data used § 1997 -2007 § IRB approved § 3, 796 episodes of acute respiratory illness care available

Preferential Collection from Children and Young Adults Range: 0 – 103 years 55. 6%

Preferential Collection from Children and Young Adults Range: 0 – 103 years 55. 6% female

Predictors Working definition of ILI § F+Cor. ST § F = Fever on symptom

Predictors Working definition of ILI § F+Cor. ST § F = Fever on symptom checklist § No requirement for level or documentation § Cor. ST = Cough and/or Sore Throat § s. F+Cor. ST (includes seasonality) § December through March § Period with > 90% of influenza cases

Outcomes influenza isolation § Paradigm 1: “clinical primary care” § Influenza (+) vs. all

Outcomes influenza isolation § Paradigm 1: “clinical primary care” § Influenza (+) vs. all other specimens § Influenza = 1230 § Non-influenza + no virus isolated = 2566 § Paradigm 2: “ideal virus capture” § Influenza (+) vs. non-influenza virus (+) § Influenza = 1230 § Non-influenza = 523

Distribution of outcomes Reference Season population included Yes All ARI specimens No Criteria used

Distribution of outcomes Reference Season population included Yes All ARI specimens No Criteria used Influenza (+) Influenza (-) s. F+Cor. ST (+) 1020 1034 s. F+Cor. ST ( -) 210 1532 s. F+Cor. ST (+) 1082 1529 s. F+Cor. ST ( -) 148 1037

Distribution of outcomes Reference Season population included Yes Virus (+) specimens No Criteria used

Distribution of outcomes Reference Season population included Yes Virus (+) specimens No Criteria used Influenza (+) Influenza (-) s. F+Cor. ST (+) 1020 188 s. F+Cor. ST ( -) 210 335 s. F+Cor. ST (+) 1082 302 s. F+Cor. ST ( -) 148 221

Performance Characteristics Criteria Reference F+Cor. ST All ARI OR flu 4. 96 F+Cor. ST

Performance Characteristics Criteria Reference F+Cor. ST All ARI OR flu 4. 96 F+Cor. ST Virus (+) 5. 25 0. 88 0. 42 0. 78 0. 60 s. F+Cor. ST All ARI 7. 20 0. 83 0. 60 0. 50 0. 88 s. F+Cor. ST Virus (+) 8. 66 0. 83 0. 64 0. 84 0. 62 population Sens Spec PPV NPV 0. 88 0. 40 0. 41 0. 88

Additional Fiddling assessing effects of age § Concentrate on seasonal data § Clinician informed

Additional Fiddling assessing effects of age § Concentrate on seasonal data § Clinician informed by surveillance § Concentrate on virus (+) specimens § Symptomatic patient § Early in illness § Collection technique good § Concentrate on age categories § § 0 -4 5 -24 25 -64 65+

Effects of age (reference age = 25 -64 years) Binary logistic regression via Minitab

Effects of age (reference age = 25 -64 years) Binary logistic regression via Minitab – Release 13. 1 Factor Odds Ratio 95% CI s. F+Cor. ST 7. 55* 5. 81 – 9. 80 0 -4 years 0. 10* 0. 07 – 0. 14 5 -24 years 1. 21 0. 90 – 1. 65 25 -64 years reference 65+ years 1. 67 0. 86 – 3. 25 * P<0. 001

What about little kids? the percent of ILI cases due to: Virus Influenza Adenovirus

What about little kids? the percent of ILI cases due to: Virus Influenza Adenovirus Parainfluenza Rhinovirus RSV Herpes simplex Enterovirus 0 -4 years 34. 8 6. 6 14. 4 1. 7 37. 0 1. 1 2. 9 5+ years 84. 7 3. 2 3. 3 3. 7 1. 4 2. 0 0. 8

Conclusions § ILI (F+Cor. ST) performs well § § Public health tool for surveillance

Conclusions § ILI (F+Cor. ST) performs well § § Public health tool for surveillance Early detection of influenza High sensitivity ( 0. 88) Limited by low specificity (0. 40) § but fined tuned by virological methods § ILI (s. F+Cor. ST) performs well § § Clinician tool for diagnosis of influenza Informed by public health surveillance High PPV (0. 84); moderate NPV Excluding young children raises PPV to 0. 90

Conclusions § Influenza is the primary cause of ILI in patients age 5+ years

Conclusions § Influenza is the primary cause of ILI in patients age 5+ years § Many viruses can cause ILI in children 0 -4 years of age. ILI should not be used for diagnosis alone in this group. § ILI for predicting influenza infection has been validated in a primary care, community-based population

Final Words If influenza is in the community and your patient is over 4

Final Words If influenza is in the community and your patient is over 4 years old Is it influenza? F+Cor. ST “Of Course”

Acknowledgements § Wisconsin Primary Care Clinicians § UW-DFM residency clinics § Numerous private physicians

Acknowledgements § Wisconsin Primary Care Clinicians § UW-DFM residency clinics § Numerous private physicians § UW-DFM Summer Student Research and Clinical Assistantship Program § Ms. Alexis Eastman § Wisconsin State Laboratory of Hygiene

Additional Material

Additional Material

Basic Characteristics of Surveillance System § Mean age of patient = 26. 6 years

Basic Characteristics of Surveillance System § Mean age of patient = 26. 6 years § Range [ 0 to 103 years] § Sex § Female = 55. 6% § Male = 44. 4% § Time between illness onset and collection § Mean = 3. 86 days § Median = 2 days § Rate of virus isolation = 44. 6%

Specimens Collected during “Respiratory Virus” Season

Specimens Collected during “Respiratory Virus” Season

Collection Day (Monday through Thursday Preferred)

Collection Day (Monday through Thursday Preferred)

Most Specimens Collected at Optimal Time

Most Specimens Collected at Optimal Time

Percent of Specimens with Positive Virus Isolation

Percent of Specimens with Positive Virus Isolation