TAIR Workshop Eva Huala Donghui Li TAIR is

TAIR Workshop Eva Huala Donghui Li

TAIR is used worldwide Beijing 2, 245 TAIR visits from Beijing May 30 – June 11

This workshop will cover: p Introduction to TAIR (19: 30 – 19: 50) p Arabidopsis genome annotation (19: 50 – p Gene function annotation (20: 10 – 20: 40) 20: 10) n TAIR 7 release n p GO and PO controlled vocabularies Ara. Cyc (20: 40 – 21: 00) n Metabolic pathway database

What is TAIR*? p p NSF-funded project begun in 1999 Web resource for Arabidopsis data and stocks Literature-based manual annotation of gene function Genome annotation (gene structure, computational gene function) URL *

Introduction to TAIR p TAIR website n n Searching Popular tools How to order stocks How to find help

Portals

Tools

Search

Two ways to search in TAIR Quick Search Advanced Search

Quick Search ufo

Names Description

GO annotations Expression

Sequences Maps

Mutations Seed lines

Links to other sites

Seed lines Links to other sites

Seed lines Links to other sites

Seed lines Links to other sites

Seed lines Links to other sites

Comments References

Most popular tools at TAIR BLAST p Genome Browsers p n n p Seq. Viewer GBrowse (coming soon) Ara. Cyc

GBrowse - coming soon

How to order stocks at TAIR Register yourself at TAIR p Associate yourself to a lab p Wait 1 -2 days for account activation p Search for seed or DNA stocks p Order stocks p Pay by credit card, check or money order p

mcclintock

Very important!

How to find help at TAIR Click on Help p Click on ? p Email us at curator@arabidopsis. org p