Success Metrics in Arctos and what we hope
- Slides: 23
Success Metrics in Arctos (and what we hope to build) Emily Braker ¶ and Teresa J. Mayfield-Meyer ‡ • ¶ University of Colorado Museum of Natural History, United States of America • ‡ Museum of Southwestern Biology, Albuquerque, United States of America SPNHC 2019 Website: http: //arctosdb. org Search: http: //arctos. database. museum
Metrics Dashboards
System Stats
Georeference Report
Collection Summary Metrics TABLES Current Capabilities: • Public-facing • Quickly visualize & summarize holdings • Easy report generation • Multiple resolutions • Dynamic links CHARTS Challenges: • Limited parameters • Query-based • Static graphs • Dispersed MAPS Wish List…
Dashboard Dreams Centralized Interactive • Data filters, multiple modalities Diverse end users • Admins, museum staff, researchers, educators/students Multiple attribute handling • Beyond holdings data, e. g. , loans, agents, citations, georeferences, gap analytics, system analytics • Meaningfully aid staff in error detection and improving data
Non-Specimen Dashboards
Agent Activity Total View • Captures agent effort, products, ownership, etc. • Based on deeply structured data and resolved names • Wish List: visual dashboard to synthesize info, facilitate attribution Effort Media Projects *Supports Pubs Specimens Relationships Aliases Collections DOB 1877 -02 -27 DOD 1939 -05 -29
Specimens Global Names Total View • Captures taxon representation, Global Names classifications, synonyms, etc. • Based on deeply structured data and resolved names • Wish List: visual dashboard to synthesize info, facilitate use of current taxonomy CITES Classifications Relationships Mapping Taxon Activity Media
Participant Poll
The Extended Specimen Network: “A powerful new source of knowledge to address national priorities” From Extending U. S. Biodiversity Collections to Promote Research and Education Thiers et al. 2019 Extended specimen = physical specimen + physical specimen data + molecular data + phenotypic data + environmental data Thiers et al. 2019, Fig 1
How do we define Success? Capture the most complete representation of a collection object and use standardized data to quantify impact. Identification Citations Media Locality and Mapping Relationships and external links Parts Attributes Usage
Low Quality Data Dashboard
Most Complete Specimen Representation “Un-Metrics” Low Quality Data Dashboard
Data Improvement Tools
Standardized Data “Un-Metrics” Duplicate Agent Discovery Taxon Name Validator
Annotations – Locality & Georeferences Review locality annotations – e. g. , validation errors Crowdsourced “Hey, your Kansas record is mapping to China” Find georeferencing errors outside of a defined polygon based on assigned Higher Geography Automated Annotation
Loan Activity Loan/Citation Statistics Shipment Mapping Wish List Explorable loan statistics COLLECTION #LOANS TOTAL SPECIMENS #BORROWERS YEAR Dashboard Notifications Overdue notices, citations & Gen. Bank numbers without loan history, loans without specimens, loans without publications
Data Integration Tools
Gen. Bank Discovery Tool reciprocal linkages with Bo. LD and Iso. Bank • Gen. Bank autolinks to Arctos when researchers submit the correct GUID • If NOT…an automated discovery tool tracks down “orphaned” sequences Run Query Enter Accn# List Results Records Verify Matches reciprocal linkages with Gen. Bank
Deep-Linking Citations Publication Record Leverage external tools to document research impacts Specimens cited Specimens identified Pubs referenced (via Pubs citing this Publication (via ) Low Quality Pub Data Services ) Collecting & Primary Publication(s) Project Funding Pub Secondary Publications Pub DOIs ORCIDs DOI Finder Project NSF# Specimens Pub Pub DOIs ORCIDs Pub Pub
Summary Arctos needs more [dynamic, explorable, prettier] dashboards! Metrics beget Metrics • As we grow our ability to integrate diverse data types we connectivity and our ability to detect gaps in connectivity • Standardized data are essential to achieving a holistic view and precise metrics (as are integration tools and the community) Quality over Quantity • Capturing extended specimen data to the fullest degree possible helps us to quantify impacts and maximize benefits…. aka express SUCCESS
Thank you! All opinions expressed are our own. We would like to thank Everyone in the Arctos Working Group for putting up with multiple requests and issues on the Arctos Git. Hub. You all make our life so much richer! Special thanks to programmer Dusty Mc. Donald for his thoughtful automagic. References Thiers, Barbara, Anna Monfils, Jennifer Zaspel, Elizabeth Ellwood, Andrew Bentley, Katherine Levan, John Bates, David Jennings, Dori Contreras, Laura Lagomarsino, Paula Mabee, Linda Ford, Robert Guralnick, Robert Gropp, Marcy Revelez, Neil Cobb, James Lendemer, Katja Seltmann and Mary Catherine Aime. 2019. Extending U. S. Biodiversity Collections to Promote Research and Education Powered by Photos courtesy of: Arctos
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