SPM Resources SPM 8 Matlab 7 1 SPM
SPM Resources
SPM 8 > Matlab 7. 1 • • SPM – Mat. Lab functions & scripts • basic “toolbox” functions • macro functions/scripts • GUI functions & i/o primitives – externally linked C-code • intensive operations • memory mapping – platform • Mat. Lab on UNIX, Linux, Windows Mat. Lab: – 4 th Generation language • high level matrix based engineering maths language • basic data type is matrix • mathematical syntax – interpreted environment – graphics & GUI primitives provided – programming • scripts • functions (can compile) • objects • linked C/C++
SPM 8 BATCH
Toolboxes • Spatial • realignment, spatial normalization, segmentation, coregistration, spatial smoothing • Statistical • voxel by voxel statistical analysis • general linear model, generalized for temporal autocorrelation • random effects analyses • multiple comparisons: Corrected p-values from random field theory • plotting & results interrogation • Utilities • image display, rendering, brain extraction, image algebra • Implementation • “toolbox” of MATLAB® functions • GUI • Availability • open source academic freeware • documented and informally supported
SPMweb… • Introduction to SPM • SPM distribution: SPM 2, SPM 5, SPM 8 • Documentation & Bibliography • SPM email discussion list • SPM short course • Example data sets • SPM extensions http: //www. fil. ion. ucl. ac. uk/spm/
SPM documentation… peer reviewed literature online help & function descriptions SPM course notes, Human Brain Function & SPM manual algorithm descriptions, code annotations, pseudo-code & SPM 5/8 Manual
SPM Online Bibliography
SPM – email discussion list • spm@jiscmail. ac. uk – Web home page • http: //www. fil. ion. ucl. ac. uk/spm/support/ • Archives, archive searches, membership lists, instructions – Subscribe • http: //www. jiscmail. ac. uk/ • email jiscmail@jiscmail. ac. uk – join spm Firstname Lastname – Participate & learn • email spm@jiscmail. ac. uk • Monitored by SPMauthors • Usage queries, theoretical discussions, bug reports, patches, techniques, &c… http: //www. fil. ion. ucl. ac. uk/spm/support/ spm@jiscmail. ac. uk
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