PROTEIN SYNTHESIS copyright cmassengale 1 DNA and Genes

PROTEIN SYNTHESIS copyright cmassengale 1

DNA and Genes copyright cmassengale 2

DNA • DNA contains ____, sequences of nucleotide bases • These Genes code for polypeptides (proteins) • Proteins are used to build cells and do much of the work inside cells copyright cmassengale 3

Genes & Proteins § Proteins are made of _______ linked together by peptide bonds § ______ different amino acids exist copyright cmassengale 4

Amino Acid Structure copyright cmassengale 5

Polypeptides • Amino acid chains are called _____ copyright cmassengale 6

DNA Begins the Process • _____ is found inside the ______ • _____, however, are made in the cytoplasm of cells by organelles called _________ • Ribosomes may be free in the cytosol or attached to the surface of rough ER copyright cmassengale 7

Starting with DNA • DNA ‘s code must be _____ and taken to the cytosol • In the cytoplasm, this code must be read so amino acids can be assembled to make polypeptides (proteins) • This process is called PROTEIN SYNTHESIS copyright cmassengale 8

RNA copyright cmassengale 9

Roles of RNA and DNA • _______ is the MASTER PLAN • _______ is the BLUEPRINT of the Master Plan copyright cmassengale 10

RNA Differs from DNA • RNA has a sugar ribose DNA has a sugar deoxyribose copyright cmassengale 11

Other Differences • • RNA contains the base _____ DNA has _______ RNA molecule is _______ DNA is _______ copyright cmassengale DNA 12

Structure of RNA copyright cmassengale 13

. Three Types of RNA • Messenger RNA (_____) copies DNA’s code & carries the genetic information to the ribosomes • Ribosomal RNA (_____), along with protein, makes up the ribosomes • Transfer RNA (_____) transfers amino acids to the ribosomes where proteins are synthesized copyright cmassengale 14

Messenger RNA • Long Straight chain of Nucleotides • Made in the ______ • _____ & leaves through nuclear pores • Contains the Nitrogen Bases ____ • ____( no T ) copyright cmassengale 15

Messenger RNA (m. RNA) • Carries the information for a specific protein • Made up of _____ to ____ nucleotides long • Sequence of 3 bases called _____ • AUG – methionine or start codon • UAA, UAG, or UGA – stop 16 codons copyright cmassengale

Ribosomal RNA (r. RNA) • r. RNA is a single strand 100 to 3000 nucleotides long • Globular in shape • Made inside the nucleus of a cell • Associates with proteins to form ribosomes • Most ______ form of RNA • Site of _____ copyright cmassengale 17

The Genetic Code • A _____ designates an amino acid • An amino acid may have more than one codon • There are 20 amino acids, but 64 possible codons • Some codons tell the ribosome to stop translating copyright cmassengale 18

The Genetic Code • Use the code by reading from the center to the outside • Example: AUG codes for Methionine copyright cmassengale 19

Name the Amino Acids • • • GGG? UCA? CAU? GCA? AAA? copyright cmassengale 20

Remember the Complementary Bases On DNA: A-T C-G On RNA: A-U C-G copyright cmassengale 21

Transfer RNA (t. RNA) • ______ shape • Single stranded molecule with attachment site at one end for an _______ • Opposite end has three nucleotide bases called the ________ copyright cmassengale 22

Transfer RNA amino acid attachment site U A C anticodon copyright cmassengale 23

Codons and Anticodons • The 3 bases of an anticodon are complementary to the 3 bases of a codon • Example: Codon ACU Anticodon UGA copyright cmassengale UGA ACU 24

Transcription and Translation copyright cmassengale 25

Pathway to Making a Protein ________ ____ copyright cmassengale 26

Protein Synthesis § The production or synthesis of polypeptide chains (proteins) § Two phases: _____ & _____ § ______ must be processed before it leaves the nucleus of eukaryotic cells copyright cmassengale 27

DNA RNA Protein Nuclear membrane DNA Transcription Eukaryotic Cell Pre-m. RNA Processing m. RNA Ribosome Translation Protein copyright cmassengale 28

Transcription • The process of copying the sequence of one strand of DNA, the template strand • m. RNA copies the template strand • Requires the enzyme __________ copyright cmassengale 29

Template Strand copyright cmassengale 30

Question: § What would be the complementary RNA strand for the following DNA sequence? DNA 5’-GCGTATG-3’ copyright cmassengale 31

Answer: • DNA 5’-GCGTATG-3’ • RNA 3’-CGCAUAC-5’ copyright cmassengale 32

Transcription • During transcription, ________ binds to DNA and separates the DNA strands • RNA Polymerase then uses ______ as a template to assemble nucleotides into RNA copyright cmassengale 33

Transcription • Promoters are regions on DNA that show where RNA Polymerase must bind to begin the Transcription of RNA • Called the _____ box • Specific base sequences act as signals to stop • Called the termination signal copyright cmassengale 34

RNA Polymerase copyright cmassengale 35

m. RNA Processing • After the DNA is transcribed into RNA, _______ must be done to the nucleotide chain to make the RNA ____ • _______, non-functional segments of DNA are _____ of the chain copyright cmassengale 36

m. RNA Editing • _____, segments of DNA that code for proteins, are then rejoined by the enzyme ligase • A _________ is added to the 5” end of the newly copied m. RNA • A ______ is added to the 3’ end of the RNA • The newly processed m. RNA can then _________. 37 copyright cmassengale

Result of Transcription CAP New Transcript copyright cmassengale Tail 38

m. RNA Transcript • m. RNA leaves the nucleus through its _____ and goes to the ______. copyright cmassengale 39

Translation • Translation is the process of decoding the m. RNA into a polypeptide chain • ____ read m. RNA three bases or _______ at a time and construct the proteins copyright cmassengale 40

Transcription Translation copyright cmassengale 41

Ribosomes • Made of a large and small subunit • Composed of r. RNA (40%) and proteins (60%) • Have two sites for t. RNA attachment --- P and A copyright cmassengale 42

Step 1 - Initiation • m. RNA transcript start codon ____ attaches to the small ribosomal subunit • Small subunit attaches to large ribosomal subunit m. RNA transcript copyright cmassengale 43

Ribosomes Large subunit P Site A Site m. RNA Small subunit A U G C U A C U U C G copyright cmassengale 44

Step 2 - Elongation • As ribosome moves, two t. RNA with their amino acids move into site A and P of the ribosome • ______ join the amino acids copyright cmassengale 45

Initiation aa 2 aa 1 2 -t. RNA 1 -t. RNA anticodon hydrogen bonds U A C A U G codon G A U C U A C U U C G A copyright cmassengale m. RNA 46

Elongation peptide bond aa 1 aa 3 aa 2 3 -t. RNA 1 -t. RNA anticodon hydrogen bonds U A C A U G codon 2 -t. RNA G A U C U A C U U C G A copyright cmassengale m. RNA 47

aa 1 peptide bond aa 3 aa 2 1 -t. RNA 3 -t. RNA U A C (leaves) 2 -t. RNA A U G G A A G A U C U A C U U C G A m. RNA copyright cmassengale Ribosomes move over one codon 48

aa 1 peptide bonds aa 2 aa 4 aa 3 4 -t. RNA 2 -t. RNA A U G 3 -t. RNA G C U G A A C U U C G A A C U m. RNA copyright cmassengale 49

aa 1 peptide bonds aa 4 aa 2 aa 3 2 -t. RNA 4 -t. RNA G A U (leaves) 3 -t. RNA A U G G C U G A A C U U C G A A C U m. RNA copyright cmassengale Ribosomes move over one codon 50

aa 1 peptide bonds aa 5 aa 2 aa 3 aa 4 5 -t. RNA U G A 3 -t. RNA 4 -t. RNA G A A G C U A C U U C G A A C U m. RNA copyright cmassengale 51

peptide bonds aa 1 aa 5 aa 2 aa 3 aa 4 5 -t. RNA U G A 3 -t. RNA G A A 4 -t. RNA G C U A C U U C G A A C U m. RNA copyright cmassengale Ribosomes move over one codon 52

aa 4 aa 5 Termination aa 199 aa 3 primary structure aa 2 of a protein aa 200 aa 1 200 -t. RNA A C U terminator or stop codon C A U G U U U A G m. RNA copyright cmassengale 53

End Product –The Protein! • The end products of protein synthesis is a primary structure of a protein • A sequence of amino acid bonded together by peptide bonds aa 2 aa 1 aa 3 aa 4 aa 5 aa 199 copyright cmassengale aa 200 54

Messenger RNA (m. RNA) start codon m. RNA A U G G G C U C C A U C G G C A U A A codon 1 protein methionine codon 2 codon 3 glycine serine codon 4 isoleucine codon 5 codon 6 glycine alanine codon 7 stop codon Primary structure of a protein aa 1 aa 2 aa 3 aa 4 cmassengale peptidecopyright bonds aa 5 aa 6 55

copyright cmassengale 56