prefix xsd http www w 3 org2001XMLSchema prefix

@prefix xsd: <http: //www. w 3. org/2001/XMLSchema#>. @prefix msv: <http: //purl. jp/bio/11/msv/>. @prefix srs: <http: //www. ncbi. nlm. nih. gov/sra/>. @prefix ncbi_refseq: <http: //www. ncbi. nlm. nih. gov/nuccore/>. @prefix ko: <http: //www. genome. jp/dbget-bin/www_bget? >. @prefix path: <http: //www. genome. jp/dbget-bin/www_bget? >. srs: DRS 000009 msv: contained. KO [ msv: assigned. KO ko: K 04033; msv: KOCount "2. 21645157258498 e-05"^^xsd: float; ]. srs: DRS 000009 msv: contained. KO [ msv: assigned. KO ko: K 00937; msv: KOCount "2. 41630257974925 e-05"^^xsd: float; ]. srs: DRS 000009 msv: contained. KO [ msv: assigned. KO ko: K 07735; msv: KOCount "1. 38171967047323 e-05"^^xsd: float; ].

@prefix srs: <http: //www. ncbi. nlm. nih. gov/sra/>. @prefix meo: <http: //purl. jp/bio/11/meo/>. @prefix gaz: <http: //purl. obolibrary. org/obo/>. srs: DRS 000406 srs: DRS 000407 srs: DRS 000578 srs: ERS 000029 srs: ERS 000030 srs: ERS 007758 srs: ERS 007759 srs: ERS 007760 srs: ERS 007761 srs: ERS 007762 srs: ERS 007763 srs: ERS 007764 srs: ERS 007765 srs: ERS 008538 srs: ERS 008539 srs: ERS 008540 srs: ERS 008541 srs: ERS 008542 srs: ERS 008543 srs: ERS 009010 srs: ERS 009017 srs: ERS 009018 srs: ERS 009172 srs: ERS 009173 srs: ERS 009174 srs: ERS 009175 srs: ERS 009176 meo: MEO_0000437 meo: MEO_0000718. meo: MEO_0000437 meo: MEO_0000736. meo: MEO_0000437 meo: MEO_0000658. meo: MEO_0000437 meo: MEO_0000395. meo: MEO_0000437 meo: MEO_0000737. meo: MEO_0000437 meo: MEO_0000740. meo: MEO_0000437 meo: MEO_0000658.

DRS 000009 DRS 000201 DRS 000406 DRS 000407 ERS 000029 ERS 007239 ERS 007241 ERS 015567 ERS 015568 ERS 016117 ERS 016118 ERS 033180 SRS 000238 SRS 000239 SRS 000240 SRS 000241 SRS 000242 MEO_0000437 MEO_0000437 MEO_0000437 MEO_0000437 MEO_0000437 MEO_0000137 MEO_0000718 MEO_0000658 MEO_0000056 MEO_0000024 MEO_0000038 MEO_0000449 MEO_0000458 MEO_0000704 MEO_0000122 MEO_0000122 K 00937: 2. 41630257974925 e-05 K 07735: 1. 38171967047323 e-05 K 0 MEO_0000437 MEO_0000416 MEO_0000437 MEO_0000026 K K 02224: 3. 31285985940223 e-06 K 07749: 1. 98771591564134 e-05 K 02793: 9. 26535036922421 e-06 K 03076: 9. 26535036922421 e-06 K 0 MEO_0000439 K 03086: 0. 3333333 K 07735: 0. 000704225352112676 K 03117: 0. 00727663895057533 K K 01952: 0. 00181833182080686 K 07749: 0. 000869565217391304 K MEO_0000437 MEO_0000027 MEO_0000437 MEO_0000038 K K 02777: 0. 00294985250737463 K 02703: 0. 0206489675516224 K 04 MEO_0000439 K 03117: 0. 000471119694989063 K 00954: 0. 0087782 MEO_0000439 K 00954: 0. 000635002877817424 K 02224: 9. 9898076 K 00549: 0. 000175100682892663 K 13639: 8. 75503414463316 e-05 K K 07084: 0. 00202839756592292 K 01825: 0. 00101419878296146 K 02275: 0. 00079428117553614 K 03076: 0. 0039714058776807 K 04 K 03616: 0. 00272108843537415 K 04748: 0. 00136054421768707 K 02224: 0. 00150037509377344 K 01012: 0. 000750187546886722 K 1 K 00163: 0. 00207900208 K 06181: 0. 00207900208 K 0

環境名(76個) Bone Colon Gut Lung Midgut Tooth acid mine drainage activated sludge aerobic animal-associated habitat aquaculture aquarium aquatic biome beach sand biofilm bioreactor biotic mesoscopic physical object brine cave coastal water compost coral reef fresh water freshwater biome freshwater habitat frost flowers fungi associated hot spring hot water KO数 4967 3825 3595 211 3703 2602 2175 3486 2087 2819 1057 268 3231 2593 2588 3490 1782 470 1752 6 1870 1988 233 4034 3148 132 742 4270 2489 2724 検出KO K 01467 K 03046 K 01534 K 00351 K 03043 K 03046 K 07496 K 03046 K 03701 K 03046 K 08151 K 02112 K 07637 K 03046 K 06895 K 02358 K 06147 K 00558 K 03046 K 00548 K 03043 K 03046 K 08884 K 00558 K 03046 K 02014 K 07637 K 03497 K 03046 K 03043 K 01995 K 03043 K 03046 K 03043 K 02014 K 02358 K 03046 K 03043 K 00879 K 02689 K 07660 K 02358 K 03545 K 03046 K 02004 K 01955 K 03043 K 01915 K 03046 K 03043 K 02112 K 04077 K 03111 K 03043 K 03296 K 07660 K 00638 K 03043 K 02355 K 05786 K 04043 K 03893 K 03086 K 01153 K 04077 K 03043 K 04077 K 15269 K 01467 K 07319 K 04077 K 01868 K 02355 K 03657 K 03046 K 02358 K 00342 K 02014 K 02358 K 01467 K 08151 K 02357 K 02358 K 00656 K 07319 K 01190 K 04077 K 02358 K 03703 K 02016 K 02355 K 02358 K 09822 K 03043 K 02358 K 03696 K 03406 K 03149 K 07496 K 03043 K 00574 K 03737 K 03046 K 00090 K 04077 K 04043 K 02358 K 02355 K 01711 K 04043 K 07496 K 01999 K 00548 K 03046 K 07496 K 00860 K 02358 K 01610 K 00981 K 06180 K 02014 K 01955 K 07267 K 02355 K 01955 K 07637 K 02358 K 03438 K 01494 K 03086 K 01951 K 03043 K 16787 K 02111 K 03070 K 17321 K 02945 K 04077 K 06200 K 02703 K 02835 K 07496 K 00525 K 00123 K 01494 K 03702 K 03070 K 03737 K 03483 K 03701 K 07119 K 02355 K 07399 K 04043 K 00666 K 02945 K 03046 K 00209 K 06926 K 03070 K 13935 K 03701 K 01681 K 04043 K 05559 K 02355 K 02274 K 04567 K 01711 K 01999 K 02835 K 03296 K 01652 K 06926 K 00833 K 04043 K 02886 K 00666 K 12257 K 03296 K 03147 K 01533 K 02112 K 00525 K 02274 K 03596 K 06940 K 03465 K 01955 K 00626 K 06147 K 01421 K 03086 K 03701 K 02945 K 03046 K 03286 K 00116 K 04077 K 07646 K 01955 K 02470 K 00239 K 04077 K 01915 K 07491 K 03695 K 02575 K 01873 K 16786 K 03406 K 02355 K 00239 K 06919 K 06942 K 00383 K 00525 K 00382 K 00962 K 03070 K 03086 K 04043 K 02004 K 02355 K 02112 K 07798 K 01153 K 07024 K 02470 K 01955 K 03086 K 03070 K 03043 K 00243 K 01681 K 03070 K 03043 K 01937 K 00548 K 01681 K 01915 K 02274 K 01190 K 03798 K 03406 K 02004 K 03316 K 04077 K 03696 K 01955 K 00962 K 01999 K 03046 K 00525 K 02274 K 02111 K 01869 K 02355 K 00658 K 02358 K 03701 K 03070 K 03702 K 02529 K 01873 K 03701 K 03695 K 04043 K K 06147 K K 03320 K K 04753 K K 03701 K K 02358 K K 03701 K K 02355 K K 09687 K K 03296 K K 06207 K K 03043 K K 03782 K K 00799 K K 01872 K K 00383 K K 03701 K K 03596 K K 03406 K 04043 K 06160 K 03695 K 11942 K 01653 K 01687 K 03043 K 03465 K 01992 K 06207 K 01915 K 02689 K 02358 K 01653 K 11942 K 02355 K 02761 K 07491 K 00652 K 02111 K 03070 K 02044 K 15269 K 02757 K 01955 K 00370 K 02355 K 06890 K 11384 K 00525 K 01638 K 01681 K 02756 K 02755 K 00265 K 01223 K 02358 K 03296 K 04077 K 03701 K 02470 K 02314 K 02755 K 02756 K 04077 K 00688 K 03043 K 06132 K 02886 K 01955 K 07124 K 02040 K 02355 K 04043 K 02198 K 00615 K 00383 K 03147 K K K K K

環境名(76個) KO value(6748) Bone 0. 000789385473509898 0. 000160666213292008 0. 0158683978688661 0. 000123747173680209 0. 000527599870410 Colon 0. 000277507309032474 6. 98431323247986 e-07 0. 00335571144997611 0 0. 0004405391001228277 0. 0015914 Gut 0 0 0. 002214946594388592 0 0. 000280140799384433 7. 88456989671213 e-05 0 0. 0004600 Lung 0 0 0 5. 19089516987204 e-06 0 0 0 0 0 Midgut 5. 170733999507 e-05 0 0. 000483527633228109 8. 88841484009742 e-06 4. 4442074200487 e-05 0. 0002059 Tooth 2. 62767403845476 e-05 0 0. 00109301375300138 1. 22702226849781 e-05 0 0 1. 69390619181679 e acid mine drainage 0 0 0. 001471262757539524 0 0 0. 000152798888379 activated sludge 0. 0004122493548042343 0 0. 002270303034633211 0 0. 00042907350683808797 4. 0798009 aerobic 0. 000122394027171474 0 0. 000652768144914528 0 0 4. 0798009057158 e-05 0 0 8 animal-associated habitat 0. 00158820635690835 0 0. 04330143530938201 0 0. 00217990727512061 0 aquaculture 0 0 0. 000237925291458482 0 0 0. 000118962645729241 0 aquarium 0 0 0 0 aquatic biome 0. 001732071147890108 8. 59962089503412 e-05 0. 0019496693851654748 0 0 0. 000418129692949 beach sand 0. 0001268465423051241 0 0. 00060869995823694 0 3. 06325624138459 e-05 0 1. 5316281 biofilm 0. 000214647594455594 0 0. 000447404415242429 0 0 0. 000230093699267 bioreactor 0. 00207423557735711 0 0. 0011347976324937669 0 0. 000298485445098982 0. 000362699517890 biotic mesoscopic physical object 0. 00516480711714551 0 0. 0036973148634806222 9. 89119683481701 e-05 0 brine 0 0 0. 00151285930408472 0 0 0 0 0 cave 0 0 0. 000175100682892663 0 0 8. 75503414463318 e-05 0 0 0 coast 0 0 0 0 coastal water 0 3. 15437511828907 e-05 0. 00110403129140117 0 0. 000630875023657814 0 0 0 compost 4. 903563255966 e-05 0 0. 00029421379535796 0 0 3. 269042170644 e-05 9 coral reef 0 0 0. 00294117647058824 0 fresh water 9. 51642575483177 e-05 0 0. 000270587418089547 5. 71587216043636 e-05 0. 0014484390401494859 4 freshwater biome 3. 97143742206054 e-07 0 0. 000321289287444697 0 0. 000156474634429185 7. 9428748 freshwater habitat 0 0 0 0 frost flowers 0. 000462229265715795 0 0. 00138668779714738 0 0 0 0 fungi associated 9. 673000492535879 e-05 0 8. 15171229943184 e-05 7. 16772475936925 e-06 0. 000666067734029 hot spring 0. 001686645509659891 0 0. 000885821373167216 0 0 0. 000100150225338007 0. 0001771 hot water 0 0 4. 65705025267153 e-05 0 3. 22781616370502 e-06 4. 82475372417489 e

Gut: 3595(organism association-animal associated) K 01534: Cd 2+/Zn 2+-exporting ATPase [EC: 3. 6. 3. 3 3. 6. 3. 5] K 01995: branched-chain amino acid transport system ATP-binding protein K 05786: chloramphenicol-sensitive protein Rar. D K 03703: excinuclease ABC subunit C K 00981: phosphatidate cytidylyltransferase [EC: 2. 7. 7. 41] K 03483: mannitol operon transcriptional antiterminator K 00666: fatty-acyl-Co. A synthase [EC: 6. 2. 1. -] K 03046: DNA-directed RNA polymerase subunit beta' [EC: 2. 7. 7. 6] K 06919: putative DNA primase/helicase K 03043: DNA-directed RNA polymerase subunit beta [EC: 2. 7. 7. 6] K 01999: branched-chain amino acid transport system substrate-binding protein K 06147: ATP-binding cassette, subfamily B, bacterial K 02674: type IV pilus assembly protein Pil. Y 1 K 02358: elongation factor Tu K 03406: methyl-accepting chemotaxis protein K 02355: elongation factor G K 03296: hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE 1 family K 03701: excinuclease ABC subunit A K 03086: RNA polymerase primary sigma factor K 01998: branched-chain amino acid transport system permease protein

biofilm: 2588(organism association) K 06895: L-lysine exporter family protein Lys. E/Arg. O K 03545: trigger factor K 01868: threonyl-t. RNA synthetase [EC: 6. 1. 1. 3] K 00574: cyclopropane-fatty-acyl-phospholipid synthase [EC: 2. 1. 1. 79] K 01951: GMP synthase (glutamine-hydrolysing) [EC: 6. 3. 5. 2] K 13935: malonate decarboxylase epsilon subunit [EC: 2. 3. 1. 39] K 00626: acetyl-Co. A C-acetyltransferase [EC: 2. 3. 1. 9] K 02575: MFS transporter, NNP family, nitrate/nitrite transporter K 07798: Cu(I)/Ag(I) efflux system membrane protein Cus. B/Sil. B K 03406: methyl-accepting chemotaxis protein K 03070: preprotein translocase subunit Sec. A K 00799: glutathione S-transferase [EC: 2. 5. 1. 18] K 01712: urocanate hydratase [EC: 4. 2. 1. 49] K 00426: cytochrome d ubiquinol oxidase subunit II [EC: 1. 10. 3. -] K 06158: ATP-binding cassette, subfamily F, member 3 K 05896: segregation and condensation protein A K 03438: 16 S r. RNA (cytosine 1402 -N 4)-methyltransferase [EC: 2. 1. 1. 199] K 02342: DNA polymerase III subunit epsilon [EC: 2. 7. 7. 7] K 02806: PTS system, nitrogen regulatory IIA component [EC: 2. 7. 1. 69] K 00697: trehalose 6 -phosphate synthase [EC: 2. 4. 1. 15]

Fresh water: 4034(hydrosphere-water) K 00558: DNA (cytosine-5)-methyltransferase 1 [EC: 2. 1. 1. 37] K 04077: chaperonin Gro. EL K 08151: MFS transporter, DHA 1 family, tetracycline resistance protein K 04043: molecular chaperone Dna. K K 02703: photosystem II P 680 reaction center D 1 protein K 01711: GDPmannose 4, 6 -dehydratase [EC: 4. 2. 1. 47] K 03695: ATP-dependent Clp protease ATP-binding subunit Clp. B K 02358: elongation factor Tu K 15269: probable blue pigment (indigoidine) exporter K 01681: aconitate hydratase [EC: 4. 2. 1. 3] K 02314: replicative DNA helicase [EC: 3. 6. 4. 12] K 02040: phosphate transport system substrate-binding protein K 03797: carboxyl-terminal processing protease [EC: 3. 4. 21. 102] K 00432: glutathione peroxidase [EC: 1. 1. 9] K 00525: ribonucleoside-diphosphate reductase alpha chain [EC: 1. 17. 4. 1] K 03321: sulfate permease, Sul. P family K 00520: mercuric reductase [EC: 1. 16. 1. 1] K 03406: methyl-accepting chemotaxis protein K 01955: carbamoyl-phosphate synthase large subunit [EC: 6. 3. 5. 5] K 04488: nitrogen fixation protein Nif. U and related proteins

sea: 2006(hydrosphere-aquatic feature and biome) K 02358: elongation factor Tu K 04077: chaperonin Gro. EL K 03046: DNA-directed RNA polymerase subunit beta' [EC: 2. 7. 7. 6] K 03043: DNA-directed RNA polymerase subunit beta [EC: 2. 7. 7. 6] K 02355: elongation factor G K 02112: F-type H+-transporting ATPase subunit beta [EC: 3. 6. 3. 14] K 04043: molecular chaperone Dna. K K 03086: RNA polymerase primary sigma factor K 00962: polyribonucleotide nucleotidyltransferase [EC: 2. 7. 7. 8] K 14393: cation/acetate symporter K 01955: carbamoyl-phosphate synthase large subunit [EC: 6. 3. 5. 5] K 03798: cell division protease Fts. H [EC: 3. 4. 24. -] K 02111: F-type H+-transporting ATPase subunit alpha [EC: 3. 6. 3. 14] K 01915: glutamine synthetase [EC: 6. 3. 1. 2] K 15987: K(+)-stimulated pyrophosphate-energized sodium pump [EC: 3. 6. 1. 1] K 01937: CTP synthase [EC: 6. 3. 4. 2] K 03702: excinuclease ABC subunit B K 03628: transcription termination factor Rho K 01338: ATP-dependent Lon protease [EC: 3. 4. 21. 53] K 03701: excinuclease ABC subunit A

soil: 6009(geosphere-rock, sand soil) K 03046: DNA-directed RNA polymerase subunit beta' [EC: 2. 7. 7. 6] K 01955: carbamoyl-phosphate synthase large subunit [EC: 6. 3. 5. 5] K 03043: DNA-directed RNA polymerase subunit beta [EC: 2. 7. 7. 6] K 04077: chaperonin Gro. EL K 02358: elongation factor Tu K 00128: aldehyde dehydrogenase (NAD+) [EC: 1. 2. 1. 3] K 03086: RNA polymerase primary sigma factor K 03701: excinuclease ABC subunit A K 03070: preprotein translocase subunit Sec. A K 03695: ATP-dependent Clp protease ATP-binding subunit Clp. B K 04043: molecular chaperone Dna. K K 00024: malate dehydrogenase [EC: 1. 1. 1. 37] K 02355: elongation factor G K 01577: oxalyl-Co. A decarboxylase [EC: 4. 1. 1. 8] K 09456: putative acyl-Co. A dehydrogenase K 07588: LAO/AO transport system kinase [EC: 2. 7. -. -] K 00265: glutamate synthase (NADPH/NADH) large chain [EC: 1. 4. 1. 13 1. 4. 1. 14] K 06048: carboxylate-amine ligase [EC: 6. 3. -. -] K 03544: ATP-dependent Clp protease ATP-binding subunit Clp. X K 00525: ribonucleoside-diphosphate reductase alpha chain [EC: 1. 17. 4. 1]

Activated sludge: 3486(human activity association-waste treatment sludge) K 03046: DNA-directed RNA polymerase subunit beta' [EC: 2. 7. 7. 6] K 02358: elongation factor Tu K 04077: chaperonin Gro. EL K 03043: DNA-directed RNA polymerase subunit beta [EC: 2. 7. 7. 6] K 02355: elongation factor G K 04043: molecular chaperone Dna. K K 02112: F-type H+-transporting ATPase subunit beta [EC: 3. 6. 3. 14] K 01955: carbamoyl-phosphate synthase large subunit [EC: 6. 3. 5. 5] K 00962: polyribonucleotide nucleotidyltransferase [EC: 2. 7. 7. 8] K 01937: CTP synthase [EC: 6. 3. 4. 2] K 02111: F-type H+-transporting ATPase subunit alpha [EC: 3. 6. 3. 14] K 03701: excinuclease ABC subunit A K 03798: cell division protease Fts. H [EC: 3. 4. 24. -] K 03086: RNA polymerase primary sigma factor K 01915: glutamine synthetase [EC: 6. 3. 1. 2] K 00789: S-adenosylmethionine synthetase [EC: 2. 5. 1. 6] K 14393: cation/acetate symporter K 01895: acetyl-Co. A synthetase [EC: 6. 2. 1. 1] K 02470: DNA gyrase subunit B [EC: 5. 99. 1. 3] K 09014: Fe-S cluster assembly protein Suf. B

KO annotation 検出環境数 K 04043: molecular chaperone Dna. K 69 K 02112: F-type H+-transporting ATPase subunit beta [EC: 3. 6. 3. 14] 66 K 03043: DNA-directed RNA polymerase subunit beta [EC: 2. 7. 7. 6] 66 K 02355: elongation factor G 65 K 02111: F-type H+-transporting ATPase subunit alpha [EC: 3. 6. 3. 14] 64 K 02945: small subunit ribosomal protein S 1 64 K 03046: DNA-directed RNA polymerase subunit beta' [EC: 2. 7. 7. 6] 64 K 03701: excinuclease ABC subunit A 64 K 01955: carbamoyl-phosphate synthase large subunit [EC: 6. 3. 5. 5] 64 K 00548: 5 -methyltetrahydrofolate--homocysteine methyltransferase [EC: 2. 1. 1. 13] 63 K 03086: RNA polymerase primary sigma factor 63 K 01952: phosphoribosylformylglycinamidine synthase [EC: 6. 3. 5. 3] 63 K 06147: ATP-binding cassette, subfamily B, bacterial 63 K 00615: transketolase [EC: 2. 2. 1. 1] 63 K 03798: cell division protease Fts. H [EC: 3. 4. 24. -] 63 K 04077: chaperonin Gro. EL 63 K 03076: preprotein translocase subunit Sec. Y 63 K 01940: argininosuccinate synthase [EC: 6. 3. 4. 5] 63 K 03296: hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE 1 family 62 K 00526: ribonucleoside-diphosphate reductase beta chain [EC: 1. 17. 4. 1] 62