Mussels contraction biophysics Kinematics and dynamics rotation motion

Mussel’s contraction biophysics. Kinematics and dynamics rotation motion. Oscillation and wave. Mechanical wave. Acoustics.

Waves, the Wave Equation, and Phase Velocity What is a wave? Forward [f(x-vt)] vs. backward [f(x+vt)] propagating waves The one-dimensional wave equation Phase velocity Complex numbers

What is a wave? A wave is anything that moves. To displace any function f(x) to the right, just change its argument from x to x-a, where a is a positive number. If we let a = v t, where v is positive and t is time, then the displacement will increase with time. So f(x-vt) represents a rightward, or forward, propagating wave. Similarly, f(x+vt) represents a leftward, or backward, propagating wave. v will be the velocity of the wave.

The one-dimensional wave equation has the simple solution: where f(u) can be any twice-differentiable function.

Proof that f(x±vt) solves the wave equation 1. Write f(x±vt) as f(u), where u=x±vt. So and 2. Now, use the chain rule: 3. So Þ and Þ 4. Substituting into the wave equation: QED

The 1 D wave equation for light waves We’ll use cosine- and sine-wave solutions: or where:

A simpler equation for a harmonic wave: E(x, t) = A cos([kx – wt] – q) Use the trigonometric identity: cos(u–v) = cos(u)cos(v) + sin(u)sin(v) to obtain: E(x, t) = A cos(kx – wt) cos(q) + A sin(kx – wt) sin(q) which is the same result as before, as long as: A cos(q) = B and A sin(q) = C Life will get even simpler in a few minutes!

Definitions: Amplitude and Absolute phase E(x, t) = A cos([kx – wt] – q) A = Amplitude q = Absolute phase (or initial phase)

Definitions Spatial quantities: Temporal quantities:

The Phase Velocity How fast is the wave traveling? Velocity is a reference distance divided by a reference time. The phase velocity is the wavelength / period: v = l/t In terms of the k-vector, k = 2 p/ l, and the angular frequency, w = 2 p/ t, this is: v = w/k

The Phase of a Wave The phase is everything inside the cosine. E(t) = A cos(j), where j = kx – wt – q We give the phase a special name because it comes up so often. In terms of the phase, w = – ¶j/¶t k = ¶j/¶x and – ¶j/¶t v = ––––––– ¶j/¶x

Electromagnetism is linear: The principle of “Superposition” holds. If E 1(x, t) and E 2(x, t) are solutions to Maxwell’s equations, then E 1(x, t) + E 2(x, t) is also a solution. Proof: and Typically, one sine wave plus another equals a sine wave. This means that light beams can pass through each other. It also means that waves can constructively or destructively interfere.

Complex numbers Consider a point, P = (x, y), on a 2 D Cartesian grid. Let the x-coordinate be the real part and the y-coordinate the imaginary part of a complex number. So, instead of using an ordered pair, (x, y), we write: P = x+iy = A cos(j) + i A sin(j) where i = (-1)^1/2

Euler's Formula exp(ij) = cos(j) + i sin(j) so the point, P = A cos(j) + i A sin(j), can be written: P = A exp(ij) where A = Amplitude j = Phase

Proof of Euler's Formula exp(ij) = cos(j) + i sin(j) Using Taylor Series:

Complex number theorems

More complex number theorems 1. Any complex number, z, can be written: So and z = Re{ z } + i Im{ z } Re{ z } = 1/2 ( z + z* ) Im{ z } = 1/2 i ( z – z* ) where z* is the complex conjugate of z ( i ® –i ) 2. The "magnitude, " |z|, of a complex number is: |z|2 = z z* 3. To convert z into polar form, A exp(ij): A 2 = Re{ z }2 + Im{ z }2 tan(j) = Im{ z } / Re{ z }

We can also differentiate exp(ikx) as if the argument were real.

Waves using complex numbers The electric field of a light wave can be written: E(x, t) = A cos(kx – wt – q) Since exp(ij) = cos(j) + i sin(j), E(x, t) can also be written: E(x, t) = Re { A exp[i(kx – wt – q)] } or E(x, t) = 1/2 A exp[i(kx – wt – q)] } + c. c. where "+ c. c. " means "plus the complex conjugate of everything before the plus sign. "

The 3 D wave equation for the electric field or which has the solution: where and

Waves using complex amplitudes We can let the amplitude be complex: where we've separated out the constant stuff from the rapidly changing stuff. The resulting "complex amplitude" is: So: How do you know if E 0 is real or complex? Sometimes people use the "~", but not always. So always assume it's complex.