Mockup Smart. R: Correlation Workflow > Fetch Data x axis y axis Can plot Proteomics vs m. RNAmicroarray data (Optional) Subsetting variable Numeric (binned) Age =< 35 Age between 35 and 45 Age >= 45
Mockup Smart. R: Correlation Workflow > Preprocess (Optional) Subsetting variable y axis x axis Aggregate Probes Raw intensity (Linear scale) Perform log 2 Perform log 10
Smart. R: Correlation Workflow > Run Analysis Mockup x axis y axis Subsetting variable (Optional) Calculate relative fold-change from baseline Use cohorts as subsets Calculate change from baseline Use Subsetting variable Sex Race Age Height Weight Merge nodes Correlation type Merge nodes
http: //bl. ocks. org/nbremer/801 c 4 bb 101 e 86 d 19 a 1 d 0
Advanced Workflow Correlation + Scatter Plot with Linear Regression
Correlation Analysis Scatter Plot with Linear Regression
1 Plot with 1 linear regression straight line Gene with 1 probe
2 Plots with 1 linear regression straight line Gene with 2 probes Gene with 1 probe
1 Plot with 2 linear regression straight line Gene with 1 probe Gene with 2 probes
2 Plots with 2 linear regression straight line Gene with 2 probes
Plot high dim from different platforms: Example: Proteomics data versus m. RNAmicroarray data