Mockup Smart R Box Plot Mockup Smart R

Mockup Smart. R Box Plot

Mockup Smart. R: Box Plot Workflow > Fetch Data Main variable (Optional) Subsetting variable

Mockup Smart. R: Box Plot Workflow > Preprocess (Optional) Subsetting variable Main variable Aggregate Probes Raw intensity (Linear scale) Perform log 2 Perform log 10

Smart. R: Box Plot Workflow > Run Analysis Mockup Main variable Subsetting variable (Optional) Calculate relative fold-change from baseline Use cohorts as subsets Calculate change from baseline Use Subsetting variable Sex Race Age Height Weight Merge nodes Display each node in a separate plot Display each gene in a separate plot Vertical Box Plot Horizontal Box Plot Display each probe in a separate plot ANOVA Results

Advanced Workflow Box Plot with ANOVA

Advanced Workflow: Box Plot with ANOVA

Advanced Workflow: Box Plot with ANOVA: Ø High dim data vs categorical variable Ø High dim data vs numerical variable (binned) Ø High dim data vs High dim data (binned) Ø Numerical variable vs categorical variable Ø Numerical variable vs numerical variable (binned) Ø Numerical variable vs High dim data (binned) default Manual Binning

Advanced Workflow: Box Plot with ANOVA: High dim data vs categorical variable (binned)

Advanced Workflow: Box Plot with ANOVA: High dim data vs numerical variable (binned)

Advanced Workflow: Box Plot with ANOVA: High dim data vs categorical variables

Advanced Workflow: Box Plot with ANOVA: Numerical variable vs categorical variable 1 Numerical 2 Numerical 4 Numerical

2 Probes (gene BAX) -> Subsetting variable vs 4 bins vs 3 Probes (gene ATM) -> Main variable