Mechanically interlocked molecules in the gas phase isolated

  • Slides: 26
Download presentation
Mechanically interlocked molecules in the gas phase: isolated molecule spectroscopy and dynamics Wybren Jan

Mechanically interlocked molecules in the gas phase: isolated molecule spectroscopy and dynamics Wybren Jan Buma Molecular Photonics van ‘t Hoff Institute for Molecular Sciences University of Amsterdam E Mol Phot S

Mechanically interlocked molecules Two separate components Non-covalently bound * macrocycle * thread → binding

Mechanically interlocked molecules Two separate components Non-covalently bound * macrocycle * thread → binding site E Mol Phot S

Mechanically interlocked molecules Weak bond provides unique rotational and translational degrees of freedom that

Mechanically interlocked molecules Weak bond provides unique rotational and translational degrees of freedom that can be accessed in a controllable and reversible manner E Mol Phot S

Objectives To control and manipulate molecular motors requires * exploration of conformational landscape *

Objectives To control and manipulate molecular motors requires * exploration of conformational landscape * knowledge of interactions between the interlocked parts * characterization relative movement E Mol Phot S

Gas phase experiments * isolate molecules from external effects (solvent) * heating induces changes

Gas phase experiments * isolate molecules from external effects (solvent) * heating induces changes or decomposition * laser desorption technique to vaporize them * cool molecules by entraining them into supersonic expansion E Mol Phot S

High-resolution spectroscopy Laser desorption Mass spectrum + supersonic beam Excitation spectrum IR absorption spectrum

High-resolution spectroscopy Laser desorption Mass spectrum + supersonic beam Excitation spectrum IR absorption spectrum E Mol Phot S

Spectroscopy desorption laser ions detector 1064 nm nozzle sample supersonic beam Excitation & ionization

Spectroscopy desorption laser ions detector 1064 nm nozzle sample supersonic beam Excitation & ionization laser E Mol Phot S

Multiphoton ionization spectroscopy + ion IE S 1 S 0 Excitation energy Mass-selected vibrationally-resolved

Multiphoton ionization spectroscopy + ion IE S 1 S 0 Excitation energy Mass-selected vibrationally-resolved excitation spectra E Mol Phot S

IR ion dip spectroscopy + detection IE NH stretch frequencies diagnostic of details (changes

IR ion dip spectroscopy + detection IE NH stretch frequencies diagnostic of details (changes in) hydrogen-bonding S 1 0 1 Ion signal S 0 v=1 S 0 v=0 IR UV ~ 200 ns E Mol Phot S

Does it work ? rotaxane 1148 amu macrocycle E Mol Phot S

Does it work ? rotaxane 1148 amu macrocycle E Mol Phot S

Problems to be tackled today I. How does the macrocycle effect the II. conformational

Problems to be tackled today I. How does the macrocycle effect the II. conformational phase space of the thread ? II. Can we characterise the interactions between macrocycle and thread and find signatures for them ? E Mol Phot S

Building blocks in the gas phase E Mol Phot S

Building blocks in the gas phase E Mol Phot S

Excitation spectrum thread 6 b 01101 6 b 011201 origin 9 a 01 101

Excitation spectrum thread 6 b 01101 6 b 011201 origin 9 a 01 101 E Mol Phot S

Excitation spectrum thread E Mol Phot S

Excitation spectrum thread E Mol Phot S

Low-frequency vibrations thread FFT 49 cm-1 12 cm-1 E Mol Phot S

Low-frequency vibrations thread FFT 49 cm-1 12 cm-1 E Mol Phot S

Cooling conditions ~30 cm-1 argon ~12 cm-1 xenon E Mol Phot S

Cooling conditions ~30 cm-1 argon ~12 cm-1 xenon E Mol Phot S

193 nm ionization Molecular motors in the gas phase E Mol Phot S

193 nm ionization Molecular motors in the gas phase E Mol Phot S

Molecular motors in the gas phase ~10 cm-1 ~30 cm-1 Direct view on conformational

Molecular motors in the gas phase ~10 cm-1 ~30 cm-1 Direct view on conformational phase space restriction by macrocycle E Mol Phot S

Mechanically interlocked molecules E Mol Phot S

Mechanically interlocked molecules E Mol Phot S

REMPI excitation spectroscopy: macrocycle E Mol Phot S

REMPI excitation spectroscopy: macrocycle E Mol Phot S

Ion-dip spectroscopy: macrocycle C-H N-H E Mol Phot S

Ion-dip spectroscopy: macrocycle C-H N-H E Mol Phot S

Ion-dip spectroscopy: rotaxane E Mol Phot S

Ion-dip spectroscopy: rotaxane E Mol Phot S

Ion-dip spectroscopy: rotaxane NH thread NH macrocycle NH. . . O=C E Mol Phot

Ion-dip spectroscopy: rotaxane NH thread NH macrocycle NH. . . O=C E Mol Phot S

Present experiments IR-UV hole-burning spectroscopy at Free Electron Laser for Infrared e. Xperiments (FELIX)

Present experiments IR-UV hole-burning spectroscopy at Free Electron Laser for Infrared e. Xperiments (FELIX) Far IR (30 - 2000 cm-1) (C=O, fingerprint region) brings within reach: - detailed view on conformational landscape - vibrations of macrocycle with respect to the thread (< 400 cm-1) E Mol Phot S

Conclusions We can bring supramolecular assemblies in the gas phase and perform high-resolution spectroscopy

Conclusions We can bring supramolecular assemblies in the gas phase and perform high-resolution spectroscopy §Influence of macrocycle on conformational phase space thread §Conformational flexibility available to assembly E Mol Phot S

Uv. A Anouk Rijs Dick Bebelaar UC Santa Barbara Ali Abu-Riziq Bridgit Crews Mattanjah

Uv. A Anouk Rijs Dick Bebelaar UC Santa Barbara Ali Abu-Riziq Bridgit Crews Mattanjah de Vries University of Edinburgh David Leigh Funding NWO EC-TMR (RTN) EC-FET EC-NMP EC-Marie Curie E Mol Phot S