map 3 d Using map 3 d Looking
- Slides: 12
map 3 d Using map 3 d “Looking at my data has never been so much fun!” NCRR
Command Line Control map 3 d -f daltorso. fac NCRR
More Command Line map 3 d -f daltorso. fac -p p 2_3200_77_torso. data NCRR
Still More…. map 3 d -nw -f daltorso. fac -p p 2_3200_77_torso. data -f dalepi. fac -p p 2_3200_77_epi. data map 3 d NCRR
All the options Map 3 D Version 5. 4 map 3 d USAGE: map 3 d [FILENAME] map 3 d [OPTIONS] FILENAME: the name of a file containing geometry and/or data. OPTIONS: Global: -bw border_width title_bar_height (to override the default) -c colour (default colour for all meshes) -df filename (for default settings file) -if filename (to set output image basefilename) -iv (initialize video equipment) -nv (to *not* check validity of geometry) -nw (for new window for each surface) -rl level (set report level) -ss (to have all surfaces with same geometry scale) -v (echo the version number) -vm (for video mode) -vw xmin ymin (location of video window) NCRR
…the rest of all map 3 d Per Surface: -ac (leave geometry in absolute coordinates) -al xmin xmax ymin ymax (to set colormap window location) -as xmin xmax ymin ymax (to set surface window location) -at xmin xmax ymin ymax (to set scalar window location) -c colour (for mesh) -cg colour (for vectors) -ch channels_filename (links nodes to channels in data file) -cl channellinks_flename (links channels to leadlinks) -cs scale_step_size (user set contour spacing) -dp datafilepath (pathname to the pak-data files) -ds (make this the dominant surface) -f geomfilename -ff fidfilename (. fid file to be read) -fn fidseriesnum (number of the fid series to take) -gp geomfilepath (pathname to the geometry files) -i increment (increment between file numbers) -lh (to set colormap window's orientation to be horizontal) -ll leadlinks_filename (links electrode numbers to leads) -lm landmarkfile (to read landmark file (eg. coronaries) in) NCRR
Scalar data arguments map 3 d -p pot/grad-filename (basefilename) -ph maximum_data_value (user set potential maximum) -pl minimum_data_value (user set potential minimum) -ps scaleval (scale value applied to all data) -s num 1 num 2 (first and last file numbers) -sl surfnum (to lock scaling to another surface) -t trace_lead_number (for scalar plot) NCRR
Interactive Controls Mouse map 3 d • Rotation, translation, scaling • Menu manipulation • Picking Keyboard • Toggle settings • Select options GUI • Windows for scaling, file handling, etc. NCRR
I/O and File Reading Input map 3 d • CVRTI ASCII formats -. pts, . fac, . pot, . channels, . tetra, . leadlinks, . lmarks • CVRTI graphicsio formats -. geom, . tsdf, . data, . tsdfc Output • Same as input for geometry • Image formats (. png so far) NCRR
Scripting map 3 d MAP 3 D=. . /map 3 d GEOM=. . /geom/tank DATA=. . /data/tank $MAP 3 D -nw -f ${GEOM}/25 feb 97_sock. fac -p ${DATA}/cool 1 -atdr_new. data@1 -s 1 1000 Surface 1 -ch ${GEOM}/sock 128. channels -lm ${GEOM}/25 feb 97_sock. lmarks -f ${GEOM}/25 feb 97_sock_closed. geom -p ${DATA}/cool 1 -atdr_new. data@2 -s 1 1000 Surface 2 -ch ${GEOM}/sock 128. channels -lm ${GEOM}/25 feb 97_sock. lmarks NCRR
Resulting Display map 3 d Surface 1 Surface 2 NCRR
map 3 d Demo NCRR
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