Lecture 14 Reconstructing Phylogenies 1 homoplasy analogy character

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Lecture 14: Reconstructing Phylogenies 1) homoplasy (analogy) : character not present in RCA -

Lecture 14: Reconstructing Phylogenies 1) homoplasy (analogy) : character not present in RCA - convergent evolution - parallel evolution 2) homology : character inherited from CA a) ancestral (symplesiomorphy) - little change from distant ancestor b) derived (synapomorphy) - recent change

Homology vs. Analogy 1. Same fundamental structure humerus 2. Same relationship radius to surrounding

Homology vs. Analogy 1. Same fundamental structure humerus 2. Same relationship radius to surrounding ulna characters carpals phalanges 3. Similarities in embryology

Embryology Haeckel’s (1886) biogenetic “law” : • “ontogeny recapitulates phylogeny” • each embryonic stage

Embryology Haeckel’s (1886) biogenetic “law” : • “ontogeny recapitulates phylogeny” • each embryonic stage = adult stage of ancestor WRONG! Von Baer’s (1828) law: • among related spp. , early stages are more similar than later stages • examination of early dev’t can reveal close relationships

Successive stages of vertebrate embryos: Examples fish • Cattle: metacarpals start off separate; fuse

Successive stages of vertebrate embryos: Examples fish • Cattle: metacarpals start off separate; fuse chicken during development • Anteaters: teeth present early in development; pig resorbed human

Von Baer’s Law • Sometimes useful to distinguish b/w ancestral & derived traits, not

Von Baer’s Law • Sometimes useful to distinguish b/w ancestral & derived traits, not always: • e. g. fused cannon bone – derived toothlessness in Edentates – derived But, early stages may be special adaptations - “beak” of tadpole - milk teeth of bats - cotyledons in plants

 • terminal stages of ancestor’s ontogeny may be lost e. g. paedomorphosis: (retention

• terminal stages of ancestor’s ontogeny may be lost e. g. paedomorphosis: (retention of juvenile characters in adult) - in salamanders is derived, not ancestral

Reconstruction continues… 1. distinguish homologies from analogies 2. distinguish ancestral homologies from derived homologies

Reconstruction continues… 1. distinguish homologies from analogies 2. distinguish ancestral homologies from derived homologies - need to determine polarity of change (ancestral → recent)

Strategies to Distinguish b/w Ancestral & Derived 1) morphocline or transformation series: e. g.

Strategies to Distinguish b/w Ancestral & Derived 1) morphocline or transformation series: e. g. chromosome inversions in Drosophila ABCDEFG ↔ AEDCBFG ↔ AEDFBCG - can infer sequence, but which is ancestral? a ↔ b

Outgroup Analysis • outgroup = taxon that diverged from a group before they diverged

Outgroup Analysis • outgroup = taxon that diverged from a group before they diverged from each other • principle of parsimony: fewest changes • consider: 3 spp + outgroup sp. A B C D - 1 character, 2 states sp. 1 : b sp. 2 : b sp. 3 : a sp. O: a

2 hypotheses: 1 : a → b (a = ancestral; b derived) 2 :

2 hypotheses: 1 : a → b (a = ancestral; b derived) 2 : b → a (b = ancestral; a derived) 1 b 2 b 3 O a a 1 b vs. 2 3 b a O a b→a a→b b→a b a the character state present in the outgroup is assumed to be ancestral

Butterflies • brush-footed, monarchs → 2 reduced legs • swallowtails, sulphurs → 6 functional

Butterflies • brush-footed, monarchs → 2 reduced legs • swallowtails, sulphurs → 6 functional legs • which state is ancestral ? • Moths diverged from butterflies before they diverged from each other (moths = outgroup) • moths → 6 functional legs • most parsimonious : 6 functional legs = ancestral

5 Characters Character 1: • shared by A, B, C (synapomorphy) • separates them

5 Characters Character 1: • shared by A, B, C (synapomorphy) • separates them from outgroup

Character 2: • unique derived trait in taxon B • no info about relationships

Character 2: • unique derived trait in taxon B • no info about relationships Character 3: • unique derived trait in taxon C • no info about relationships

Character 4: • synapomorphy • unites B & C Character 5: • unique derived

Character 4: • synapomorphy • unites B & C Character 5: • unique derived trait in taxon A • no info

 • Fused cannon bones in cattle; • Toothlessness in adult anteaters: • Derived

• Fused cannon bones in cattle; • Toothlessness in adult anteaters: • Derived traits b/c: unfused metacarpals & adult teeth are widespread in other mammals

Primitive characters • primitive condition in an ingroup is that which is found in

Primitive characters • primitive condition in an ingroup is that which is found in outgroups • Common characters are not necessarily primitive! • Often true: owl monkeys are only nocturnal primate; nocturnal habit is derived However…

Primitive vs. Derived • Few vertebrates lack jaws, but jawlessness in lampreys is primitive,

Primitive vs. Derived • Few vertebrates lack jaws, but jawlessness in lampreys is primitive, not derived • Distribution, not number of spp. with the trait, is important

Complete Fossil Record Can aid in analysis e. g. Progressive reduction in # of

Complete Fossil Record Can aid in analysis e. g. Progressive reduction in # of digits in horses • one-toed condition is derived • same info from outgroup analysis : rhinos & tapirs • But…

Litopterna • Extinct horse-like mammals: 3 – toed observed later than 1 – toed

Litopterna • Extinct horse-like mammals: 3 – toed observed later than 1 – toed • Outgroup analysis necessary • In fact, more detailed fossil record shows 3 – toed both before & after 1 – toed