How Lab Vantage Can Help Your Research Savanna
How Lab. Vantage Can Help Your Research Savanna Sneeringer Customer Project and Service Manager October 17, 2019
Lab. Vantage LIMS Overview Laboratory Information Management System Chain of Custody Audit Trail Good lab practices Master Data Libraries Vendor application Highly customized biospecimen module In-house customizations Supports Central Biorepository College of American Pathologists (CAP) Accreditation H. I. T. S. Research Applications team
Lab. Vantage LIMS Overview Access Browser-based Level-2 authentication Security Department Level Study Level PHI Integration Mi. Chart Web. Services Research Data Warehouse/Data. Direct
Research Studies Using Lab. Vantage Precision Health Initiative Cancer Michigan Genomics Initiative (MGI) Breast Cancer Outcomes MGI-MEND Head and Neck Cancer Biorepository Mental Health Biobank BIGBi. RD MIPACT Cancer Genetics Registry Gynecological Oncology Biorepository Skin Cancer Chronic Kidney Disease Critical Illness OB/GYN Cardiovascular Disease Metabolic Disorders And more…
Lab. Vantage Functionality Study Management Kit Management Participant Enrollment Sample Annotation Sample Processing Test Results Storage/Inventory Management Distributions
Study Management Define high level study information Study name Consents Cohorts Sites Participant ID Format
Study Management Visits & Time points
Kit Management CBR or study provided Individual or bulk Pre-defined values Sample Type Container Size Tissue Type Treatment (Additive) Barcoded labels
Participant Enrollment Event Calendar Mi. Chart Web Services Clinical & Operating Room Schedules Patient Demographics
Participant Enrollment Event Calendar Icons Participants across studies Subject vs Participant statuses Enrolled Withdrawn Declined Consent tracked at the Participant level
Sample Receipt & Annotation Receive Samples All samples are associated with a participant event Accession Collection Date Collection Method
Sample Processing & Workflow Create Derivatives and Aliquots Geneology Track Sample statuses Allocated Received In Prep In Circulation Disposed Chain of Custody
Test Results Log test results to a sample Customized test methods and parameter lists Examples: Pre-Analytic Variables DNA Quantification
Storage/Inventory Management Freezer structure Freezer/Shelf/Rack/Slot/Box/Position Box positions Customized dimensions Sorted or unsorted
Transfers and Shipments (Distributions) Custodial Domain Transfers (CDTs) Internal to Lab. Vantage Central Biorepository Other CBR studies Ship packages External to Lab. Vantage PIs Labs Sequencing Core Distributed
Reporting Data from Lab. Vantage Export to Excel Any list page within Lab. Vantage Jasper reports Custom exports from within Lab. Vantage Adhoc Query Build-your-own query tool within Lab. Vantage Tableau Used to report data to Central Biorepository and Precision Health
Research Data Warehouse (RDW) & Data. Direct RDW pulls biospecimen data from Lab. Vantage 500, 000+ specimens available 100, 000+ participants Data. Direct Cohort identification + biosamples Links biospecimens with clinical data
Onboarding Studies
Lab. Vantage Demo
Resources/Contact HITS hits. medicine. umich. edu Central Biorepository research. medicine. umich. edu/central-biorepository Data Office research. medicine. umich. edu/data-office Data. Direct datadirect. med. umich. edu
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