Data Mining Data Fusion Kathy Chiang IATUL June

Data Mining Data Fusion Kathy Chiang IATUL June 2010 http: //www. ursyn. com/twod/pages/Data%20 Mining. htm

Los Angeles Harbor --google maps

Data Mining Data Fusion

Schematic representation of the results of comparative genomics-based data mining and maximum likelihood phylogenetic inferences for each gene. The magenta and green circles denote the presence of genes belonging to the orthologous gene groups in which 3 R-WGD-derived duplicates were detected. Gray circles indicate the presence of singleton genes. Open circles denote loci that were specifically duplicated within the species. Question marks indicate the presence of partial gene sequences that are phylogenetically unsorted. Stars denote those gene groups involved in more than one network. Abbreviations: LPT, long-term potentiation; TT, taste transduction; OT, olfactory transduction; TCA, tricarboxylic acid cycle; 3 R-WGD, third-round whole genome duplication. Sato et al. BMC Evolutionary Biology 2009 9: 127 doi: 10. 1186/1471 -2148 -9 -127

Algorithms

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“automatically or semiautomatically transforming information from different sources and different points in time into a representation that provides effective support for human or automated decision making” Bostrom, H. On the Definition of Information Fusion as a Field of Research

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Temporal, dynamic

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Integration from proteins to organs: the Physiome Project Peter J. Hunter and Thomas K. Borg Nature Reviews Molecular Cell Biology 4, 237 -243 (March 2003) doi: 10. 1038/nrm 1017

Functional annotations of genes Microarray expressions of gene activity Expressed Sequence Tags Protein domains Protein protein interactions Pathway membership Transcriptional motifs Sequence similarities

Expertise Scales

DAT A Libraries Scales Dynamic Algorithms Expertise

Algorithms http: //www. wired. com/wiredscience/2009/09/googlefoodwebs/

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Malaria Vaccine Initiative http: //www. iphandbook. org/handbook/ch 17/p 21/index_print. html

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Transforming Raw Data into Valuable Content Endeca’s Information Transformation Layer (ITL) provides content acquisition and enrichment capabilities to help you efficiently combine information from any source into a single integrated view and add value on top of the raw data. http: //www. endeca. com/products-information-accessplatform-information-transformation-layer. htm

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Should we do anything? ksc 3@cornell. edu This material is based upon work supported by the National Science Foundation under Grant No. III-0712989. Any opinions, findings, and conclusions or recommendations expressed in this material are those of the author(s) and do not necessarily reflect the views of the National Science Foundation.